Development of Complex Curricula for Molecular Bionics and Infobionics Programs within a consortial* framework**
Consortium leader
PETER PAZMANY CATHOLIC UNIVERSITY
Consortium members
SEMMELWEIS UNIVERSITY, DIALOG CAMPUS PUBLISHER
The Project has been realised with the support of the European Union and has been co-financed by the European Social Fund ***
**Molekuláris bionika és Infobionika Szakok tananyagának komplex fejlesztése konzorciumi keretben
***A projekt az Európai Unió támogatásával, az Európai Szociális Alap társfinanszírozásával valósul meg.
PETER PAZMANY CATHOLIC UNIVERSITY SEMMELWEIS
UNIVERSITY
Organic and Biochemistry
Acidity and basicity of organic compounds:
donating and accepting proton and beyond
(Szerves és Biokémia )
(Szerves vegyületek aciditása, bázicitása: protont adni és kapni, s ezen túl)
semmelweis-egyetem.hu
Compiled by dr. Péter Mátyus
with contribution by dr. Gábor Krajsovszky
Formatted by dr.Balázs Balogh
Table of Contents
semmelweis-egyetem.hu
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
1. Brøensted and Lewis theory 4 – 4
2. Characterization of acidic strength 5 – 5
3. Weak and strong acids 6 – 8
4. Acidity trends 9 – 9
5. Basic strength 10 – 12
6. Proton sponges 13 – 13
Acid-base theory I.
(summary)
- Brøensted theory:
acid: proton donor base: proton acceptor every acid has a conjugate base every base has a conjugate acid
- Lewis theory (1916)
acid: electron pair acceptor base: electron pair donor
A H
+
B A+
B Hacid1 base2 base1 acid2
+
B A B A
BH3
+
(CH3)2N+
N(H3C)3 BF3Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Acid-base theory II. (summary)
Thermodynamical parameters:
concentration of water ~ is constant
[ ][ ]
[ H H O O ][ ] HA A
K
2
- eq 3
=
+ (complete equilibrium constant)+ HA + A
-O
H
2H
3O
+(pseudo equilibrium constant) characterization of acidic strength
[ ][ ]
[ ] HA A
K H
- a
=
+Ka = Keq [H2O] pKa = - log Ka if: Keq = 1 Ka = [H2O] = 55.56 pKa = - log [H2O] = - 1.745
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Acid-base theory III. (summary)
Weak acids:
Strong acids:
Keq << 1, Ka << [H2O]
pKa >> - log [H2O]
pKa >> - 1.75
e.g., CH3COOH pKa 4.76 CH3CH2OH pKa 16 Keq << 1, Ka >> [H2O]
pKa << - log [H2O]
pKa << - 1.75
e.g., HCl pKa -7
Cl CCOOH pK 16
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
R C O O
H Na O H R C O
O
Na H O H
Stronger acid pKa = 3-5
Stronger base Weaker base Weaker acid pKa = 15.7
C O
O H Na O H C O
O
H O H Na
Insoluble in water Soluble in water
R NH2 H O H H
Cl R N H
H H
Cl O H
H Stronger base Stronger acid
pKa = 1.74
Weaker acid pKa = 9-10
Weaker base
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
(CH3)3CO H H tert-butyl (CH3)3CO H2 alcohol
Stronger acid pKa = 18
Stronger base (from NaH)
Weaker base Weaker acid pKa = 35 CH3CH2O H H ethyl alcohol CH3CH2O H2 Stronger acid
pKa = 16
Stronger base (from NaH)
Weaker base Weaker acid pKa = 35
R C C H NH2
Stronger acid pKa = 25
Stronger base (from NaNH2)
liquid
NH3 R C C NH3
Weaker base Weaker acid pKa = 38
H C C H NH2
Stronger acid pKa = 25
Stronger base (from NaNH2)
liquid
NH3 H C C NH3
Weaker base Weaker acid pKa = 38
H O H NH2 H O NH3
Stronger acid pKa = 15.7
Stronger base Weaker base Weaker acid pKa = 38
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Acid-base theory IV. (summary)
Trends:
Acidity
1. C-H < N-H < O-H < F-H
electronegativity 2. HF < HCl < HBr < Hi
3. ClCH2COOH < Cl2CHCOOH
inductive effect 4. ClCH2COOH < FCH2COOH
5. R-CH2OH < R-COOH resonance effect 6. sp3 < sp2 < sp hybridisation
Organic compounds
RH < ROH < RSH < ArOH < ArSH < RCOOH < RSO2OH
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Acid-base theory V. (summary)
Basic strength
pKa also defines the strength of the conjugate base of an acid.
The higher the pKa value of the conjugate acid is, the stronger the base is.
Malodinitrile is a stronger acid, than methanol;
methoxide anion is a stronger base, than the conjugated basis of malodinitrile
H+
+
N C CH2 C N N C CH2 C N
H+
+
C
H3 O- C
H3 OH
pKa ≈ 11
pKa ~ 15
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
An acid A reacts with any base, the conjugate acid of which is weaker than the acid A.
Acid-base theory VI. (summary)
E.g.,
+ N C CH
2C N
N C CH
2C N
+
C
H
3O
-C
H
3OH
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Acid-base theory VII. (summary)
Extreme values (records)
- Superacids (Prof. George Oláh) Brønsted + Lewis acids
H0 scale for pH-s < 0 [-H0]
HF + SbF5 -H0 ~ 20-30 - The weakest acids: R-H (alkanes)
E.g.,
H+
+
C
H3 CH2- CH2 H
C H3
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
Proton sponges
2
bis(dimethylamino)-fluorene a very strong base
Unfavorable interaction between the non-bonding electron pairs of the nitrogens is relieved on protonation.
Protonation: the disadvantageous interaction is relieved, and moreover, there is a stabilising H-bond.
Results
3
N,N-dimethylaniline
pKa (conj. acid): 2 >10 3 = ca. 5
Organic and Biochemistry: Acidity and Basicity of Organic Compounds
semmelweis-egyetem.hu
2
N C H3
C H3
N
CH3 CH3
N+ C H3
C H3
N
CH3 CH3
H N
C
H3 CH3
1. Mark electronic effect of the heteroatom in the following compounds.
Explain A/ acidity B/ basicity of these compounds according to the electronic effects.
H3C CH2 CH2 OH H3C CH CH OH
A/
a) b)
a) H3C CH2 CH2 NH2 H3C CH CH NH2 b)
B/
2. Make increasing acidity order of the following compounds (in aqueous solutions):
3. Make increasing basicity order of the following compounds (in aqueous solutions):
CH
3CH
2NH
2NH H
3C
H
3C
N H
3C H
3C H
3C
I. II. III. IV.
N CH
3CH
3H
3C CH
3HO
4. Suggest reaction conditions for the following reactions:
A/ alkylation of malononitrile by methyl iodide;
B/ preparation of sodium methanolate from methanol.
A/
B/
N C CH
2C N alkilezés
I.
CH
3OH II.
alkylation